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# Marcus Vinicius Sousa Leite de Carvalho
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# marcus.decarvalho@ntu.edu.sg
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# ivsucram@gmail.com
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||||||
|
#
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||||||
|
# NANYANG TECHNOLOGICAL UNIVERSITY - NTUITIVE PTE LTD Dual License Agreement
|
||||||
|
# Non-Commercial Use Only
|
||||||
|
# This NTUITIVE License Agreement, including all exhibits ("NTUITIVE-LA") is a legal agreement between you and NTUITIVE (or “we”) located at 71 Nanyang Drive, NTU Innovation Centre, #01-109, Singapore 637722, a wholly owned subsidiary of Nanyang Technological University (“NTU”) for the software or data identified above, which may include source code, and any associated materials, text or speech files, associated media and "online" or electronic documentation and any updates we provide in our discretion (together, the "Software").
|
||||||
|
#
|
||||||
|
# By installing, copying, or otherwise using this Software, found at https://github.com/Ivsucram/ATL_Matlab, you agree to be bound by the terms of this NTUITIVE-LA. If you do not agree, do not install copy or use the Software. The Software is protected by copyright and other intellectual property laws and is licensed, not sold. If you wish to obtain a commercial royalty bearing license to this software please contact us at marcus.decarvalho@ntu.edu.sg.
|
||||||
|
#
|
||||||
|
# SCOPE OF RIGHTS:
|
||||||
|
# You may use, copy, reproduce, and distribute this Software for any non-commercial purpose, subject to the restrictions in this NTUITIVE-LA. Some purposes which can be non-commercial are teaching, academic research, public demonstrations and personal experimentation. You may also distribute this Software with books or other teaching materials, or publish the Software on websites, that are intended to teach the use of the Software for academic or other non-commercial purposes.
|
||||||
|
# You may not use or distribute this Software or any derivative works in any form for commercial purposes. Examples of commercial purposes would be running business operations, licensing, leasing, or selling the Software, distributing the Software for use with commercial products, using the Software in the creation or use of commercial products or any other activity which purpose is to procure a commercial gain to you or others.
|
||||||
|
# If the Software includes source code or data, you may create derivative works of such portions of the Software and distribute the modified Software for non-commercial purposes, as provided herein.
|
||||||
|
# If you distribute the Software or any derivative works of the Software, you will distribute them under the same terms and conditions as in this license, and you will not grant other rights to the Software or derivative works that are different from those provided by this NTUITIVE-LA.
|
||||||
|
# If you have created derivative works of the Software, and distribute such derivative works, you will cause the modified files to carry prominent notices so that recipients know that they are not receiving the original Software. Such notices must state: (i) that you have changed the Software; and (ii) the date of any changes.
|
||||||
|
#
|
||||||
|
# You may not distribute this Software or any derivative works.
|
||||||
|
# In return, we simply require that you agree:
|
||||||
|
# 1. That you will not remove any copyright or other notices from the Software.
|
||||||
|
# 2. That if any of the Software is in binary format, you will not attempt to modify such portions of the Software, or to reverse engineer or decompile them, except and only to the extent authorized by applicable law.
|
||||||
|
# 3. That NTUITIVE is granted back, without any restrictions or limitations, a non-exclusive, perpetual, irrevocable, royalty-free, assignable and sub-licensable license, to reproduce, publicly perform or display, install, use, modify, post, distribute, make and have made, sell and transfer your modifications to and/or derivative works of the Software source code or data, for any purpose.
|
||||||
|
# 4. That any feedback about the Software provided by you to us is voluntarily given, and NTUITIVE shall be free to use the feedback as it sees fit without obligation or restriction of any kind, even if the feedback is designated by you as confidential.
|
||||||
|
# 5. THAT THE SOFTWARE COMES "AS IS", WITH NO WARRANTIES. THIS MEANS NO EXPRESS, IMPLIED OR STATUTORY WARRANTY, INCLUDING WITHOUT LIMITATION, WARRANTIES OF MERCHANTABILITY OR FITNESS FOR A PARTICULAR PURPOSE, ANY WARRANTY AGAINST INTERFERENCE WITH YOUR ENJOYMENT OF THE SOFTWARE OR ANY WARRANTY OF TITLE OR NON-INFRINGEMENT. THERE IS NO WARRANTY THAT THIS SOFTWARE WILL FULFILL ANY OF YOUR PARTICULAR PURPOSES OR NEEDS. ALSO, YOU MUST PASS THIS DISCLAIMER ON WHENEVER YOU DISTRIBUTE THE SOFTWARE OR DERIVATIVE WORKS.
|
||||||
|
# 6. THAT NEITHER NTUITIVE NOR NTU NOR ANY CONTRIBUTOR TO THE SOFTWARE WILL BE LIABLE FOR ANY DAMAGES RELATED TO THE SOFTWARE OR THIS NTUITIVE-LA, INCLUDING DIRECT, INDIRECT, SPECIAL, CONSEQUENTIAL OR INCIDENTAL DAMAGES, TO THE MAXIMUM EXTENT THE LAW PERMITS, NO MATTER WHAT LEGAL THEORY IT IS BASED ON. ALSO, YOU MUST PASS THIS LIMITATION OF LIABILITY ON WHENEVER YOU DISTRIBUTE THE SOFTWARE OR DERIVATIVE WORKS.
|
||||||
|
# 7. That we have no duty of reasonable care or lack of negligence, and we are not obligated to (and will not) provide technical support for the Software.
|
||||||
|
# 8. That if you breach this NTUITIVE-LA or if you sue anyone over patents that you think may apply to or read on the Software or anyone's use of the Software, this NTUITIVE-LA (and your license and rights obtained herein) terminate automatically. Upon any such termination, you shall destroy all of your copies of the Software immediately. Sections 3, 4, 5, 6, 7, 8, 11 and 12 of this NTUITIVE-LA shall survive any termination of this NTUITIVE-LA.
|
||||||
|
# 9. That the patent rights, if any, granted to you in this NTUITIVE-LA only apply to the Software, not to any derivative works you make.
|
||||||
|
# 10. That the Software may be subject to U.S. export jurisdiction at the time it is licensed to you, and it may be subject to additional export or import laws in other places. You agree to comply with all such laws and regulations that may apply to the Software after delivery of the software to you.
|
||||||
|
# 11. That all rights not expressly granted to you in this NTUITIVE-LA are reserved.
|
||||||
|
# 12. That this NTUITIVE-LA shall be construed and controlled by the laws of the Republic of Singapore without regard to conflicts of law. If any provision of this NTUITIVE-LA shall be deemed unenforceable or contrary to law, the rest of this NTUITIVE-LA shall remain in full effect and interpreted in an enforceable manner that most nearly captures the intent of the original language.
|
||||||
|
#
|
||||||
|
# Copyright (c) NTUITIVE. All rights reserved.
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||||||
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from NeuralNetwork import NeuralNetwork
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from MySingletons import MyDevice
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import numpy as np
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import torch
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class AutoEncoder(NeuralNetwork):
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_greedy_layer_bias = None
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_greedy_layer_output_bias = None
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@property
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def latent_space(self):
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return self.layer_value[self.latent_space_position]
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@property
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def latent_space_size(self):
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return self.layers[self.latent_space_position]
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@property
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def latent_space_position(self):
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return int((len(self.layers) - 1) / 2)
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def __init__(self, layers=[]):
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NeuralNetwork.__init__(self, layers)
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for i in range(self.number_hidden_layers):
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self.activation_function[i] = self.ACTIVATION_FUNCTION_SIGMOID
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self.output_activation_function = self.ACTIVATION_FUNCTION_SIGMOID
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self.loss_function = self.LOSS_FUNCTION_MSE
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def train(self, x: torch.tensor, is_tied_weight: bool = False, noise_ratio: float = 0.0, weight_number: int = None, y: torch.tensor = None):
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if is_tied_weight:
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for i in range(int(self.number_hidden_layers/2)):
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if i == 0:
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self.output_weight = self.weight[i].T
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else:
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self.weight[-i] = self.weight[i].T
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if y is None:
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y = x
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NeuralNetwork.train(self, x=self.masking_noise(x=x, noise_ratio=noise_ratio), y=y, weight_no=weight_number)
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def test(self, x: torch.tensor, is_beta_updatable: bool = False, y: torch.tensor = None):
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if y is None:
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y = x
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return NeuralNetwork.test(self, x=x, y=y, is_beta_updatable=is_beta_updatable)
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def grow_node(self, layer_number):
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NeuralNetwork.grow_node(self, layer_number)
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self.grow_greedy_layer_bias(layer_number)
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def prune_node(self, layer_number, node_number):
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NeuralNetwork.prune_node(self, layer_number, node_number)
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self.prune_greedy_layer_bias(layer_number, node_number)
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def grow_greedy_layer_bias(self, layer_number):
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b = layer_number
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if b is self.number_hidden_layers:
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[n_out, n_in] = self._greedy_layer_output_bias.shape
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self._greedy_layer_output_bias = torch.cat((self._greedy_layer_output_bias, self.xavier_weight_initialization(1, 1)), axis=1)
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else:
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[n_out, n_in] = self._greedy_layer_bias[b].shape
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n_in = n_in + 1
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self._greedy_layer_bias[b] = np.append(self._greedy_layer_bias[b], self.xavier_weight_initialization(n_out, n_in, shape=(n_out, 1)))
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def grow_layer(self, option, number_of_nodes):
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raise TypeError('Not implemented')
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def prune_greedy_layer_bias(self, layer_number, node_number):
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def remove_nth_element(greedy_bias_tensor, n):
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bias_tensor = torch.cat([greedy_bias_tensor[0][:n], greedy_bias_tensor[0][n + 1:]])
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return bias_tensor.view(1, bias_tensor.shape[0])
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b = layer_number # readability
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n = node_number # readability
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if b is self.number_hidden_layers:
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self._greedy_layer_output_bias = remove_nth_element(self._greedy_layer_output_bias, n)
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else:
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self._greedy_layer_bias[b] = remove_nth_element(self._greedy_layer_bias[b], n)
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def greedy_layer_wise_pretrain(self, x: torch.tensor, number_epochs: int = 1, is_tied_weight: bool = False,
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noise_ratio: float = 0.0):
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for i in range(len(self.layers) - 1):
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if i > self.number_hidden_layers:
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nn = NeuralNetwork([self.layers[i], self.layers[-1], self.layers[i]], init_weights=False)
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else:
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nn = NeuralNetwork([self.layers[i], self.layers[i + 1], self.layers[i]], init_weights=False)
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nn.activation_function[0] = nn.ACTIVATION_FUNCTION_SIGMOID
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nn.output_activation_function = nn.ACTIVATION_FUNCTION_SIGMOID
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nn.loss_function = nn.LOSS_FUNCTION_MSE
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nn.momentum_rate = 0
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if i >= self.number_hidden_layers:
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nn.weight[0] = self.output_weight.clone()
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nn.bias[0] = self.output_bias.clone()
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nn.output_weight = self.output_weight.T.clone()
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if self._greedy_layer_output_bias is None:
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nodes_after = nn.layers[-1]
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self._greedy_layer_output_bias = self.xavier_weight_initialization(1, nodes_after)
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nn.output_bias = self._greedy_layer_output_bias.clone()
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else:
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nn.weight[0] = self.weight[i].clone()
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nn.bias[0] = self.bias[i].clone()
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nn.output_weight = self.weight[i].T.clone()
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try:
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nn.output_bias = self._greedy_layer_bias[i].detach()
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except (TypeError, IndexError):
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nodes_after = nn.layers[-1]
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if self._greedy_layer_bias is None:
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self._greedy_layer_bias = []
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self._greedy_layer_bias.append(self.xavier_weight_initialization(1, nodes_after))
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nn.output_bias = self._greedy_layer_bias[i].clone()
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for j in range(0, number_epochs):
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training_x = self.forward_pass(x=x).layer_value[i].detach()
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nn.train(x=self.masking_noise(x=training_x, noise_ratio=noise_ratio), y=training_x)
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if i >= self.number_hidden_layers:
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self.output_weight = nn.weight[0].clone()
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self.output_bias = nn.bias[0].clone()
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else:
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self.weight[i] = nn.weight[0].clone()
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self.bias[i] = nn.bias[0].clone()
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def update_weights_kullback_leibler(self, Xs, Xt, gamma=0.0001):
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loss = NeuralNetwork.update_weights_kullback_leibler(self, Xs, Xs, Xt, Xt, gamma)
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return loss
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def compute_evaluation_window(self, x):
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raise TypeError('Not implemented')
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def compute_bias(self, y):
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return torch.mean((self.Ey.T - y) ** 2)
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@property
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def network_variance(self):
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return torch.mean(self.Ey2 - self.Ey ** 2)
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class DenoisingAutoEncoder(AutoEncoder):
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def __init__(self, layers=[]):
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AutoEncoder.__init__(self, layers)
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# FIXME: The lines below are just to build the greedy_layer_bias. Find a more intuitive way to perform it
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random_x = np.random.rand(layers[0])
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random_x = torch.tensor(np.atleast_2d(random_x), dtype=torch.float, device=MyDevice().get())
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self.greedy_layer_wise_pretrain(x=random_x, number_epochs=0)
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def train(self, x: torch.tensor, noise_ratio: float = 0.0, is_tied_weight: bool = False, weight_number: int = None, y: torch.tensor = None):
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AutoEncoder.train(self, x=x, noise_ratio=noise_ratio, is_tied_weight=is_tied_weight, weight_number=weight_number, y=y)
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def greedy_layer_wise_pretrain(self, x: torch.tensor, number_epochs: int = 1, is_tied_weight: bool = False, noise_ratio: float = 0.0, y: torch.tensor = None):
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AutoEncoder.greedy_layer_wise_pretrain(self, x=x, number_epochs=number_epochs, is_tied_weight=is_tied_weight, noise_ratio=noise_ratio)
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@ -0,0 +1,94 @@
|
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|
# Marcus Vinicius Sousa Leite de Carvalho
|
||||||
|
# marcus.decarvalho@ntu.edu.sg
|
||||||
|
# ivsucram@gmail.com
|
||||||
|
#
|
||||||
|
# NANYANG TECHNOLOGICAL UNIVERSITY - NTUITIVE PTE LTD Dual License Agreement
|
||||||
|
# Non-Commercial Use Only
|
||||||
|
# This NTUITIVE License Agreement, including all exhibits ("NTUITIVE-LA") is a legal agreement between you and NTUITIVE (or “we”) located at 71 Nanyang Drive, NTU Innovation Centre, #01-109, Singapore 637722, a wholly owned subsidiary of Nanyang Technological University (“NTU”) for the software or data identified above, which may include source code, and any associated materials, text or speech files, associated media and "online" or electronic documentation and any updates we provide in our discretion (together, the "Software").
|
||||||
|
#
|
||||||
|
# By installing, copying, or otherwise using this Software, found at https://github.com/Ivsucram/ATL_Matlab, you agree to be bound by the terms of this NTUITIVE-LA. If you do not agree, do not install copy or use the Software. The Software is protected by copyright and other intellectual property laws and is licensed, not sold. If you wish to obtain a commercial royalty bearing license to this software please contact us at marcus.decarvalho@ntu.edu.sg.
|
||||||
|
#
|
||||||
|
# SCOPE OF RIGHTS:
|
||||||
|
# You may use, copy, reproduce, and distribute this Software for any non-commercial purpose, subject to the restrictions in this NTUITIVE-LA. Some purposes which can be non-commercial are teaching, academic research, public demonstrations and personal experimentation. You may also distribute this Software with books or other teaching materials, or publish the Software on websites, that are intended to teach the use of the Software for academic or other non-commercial purposes.
|
||||||
|
# You may not use or distribute this Software or any derivative works in any form for commercial purposes. Examples of commercial purposes would be running business operations, licensing, leasing, or selling the Software, distributing the Software for use with commercial products, using the Software in the creation or use of commercial products or any other activity which purpose is to procure a commercial gain to you or others.
|
||||||
|
# If the Software includes source code or data, you may create derivative works of such portions of the Software and distribute the modified Software for non-commercial purposes, as provided herein.
|
||||||
|
# If you distribute the Software or any derivative works of the Software, you will distribute them under the same terms and conditions as in this license, and you will not grant other rights to the Software or derivative works that are different from those provided by this NTUITIVE-LA.
|
||||||
|
# If you have created derivative works of the Software, and distribute such derivative works, you will cause the modified files to carry prominent notices so that recipients know that they are not receiving the original Software. Such notices must state: (i) that you have changed the Software; and (ii) the date of any changes.
|
||||||
|
#
|
||||||
|
# You may not distribute this Software or any derivative works.
|
||||||
|
# In return, we simply require that you agree:
|
||||||
|
# 1. That you will not remove any copyright or other notices from the Software.
|
||||||
|
# 2. That if any of the Software is in binary format, you will not attempt to modify such portions of the Software, or to reverse engineer or decompile them, except and only to the extent authorized by applicable law.
|
||||||
|
# 3. That NTUITIVE is granted back, without any restrictions or limitations, a non-exclusive, perpetual, irrevocable, royalty-free, assignable and sub-licensable license, to reproduce, publicly perform or display, install, use, modify, post, distribute, make and have made, sell and transfer your modifications to and/or derivative works of the Software source code or data, for any purpose.
|
||||||
|
# 4. That any feedback about the Software provided by you to us is voluntarily given, and NTUITIVE shall be free to use the feedback as it sees fit without obligation or restriction of any kind, even if the feedback is designated by you as confidential.
|
||||||
|
# 5. THAT THE SOFTWARE COMES "AS IS", WITH NO WARRANTIES. THIS MEANS NO EXPRESS, IMPLIED OR STATUTORY WARRANTY, INCLUDING WITHOUT LIMITATION, WARRANTIES OF MERCHANTABILITY OR FITNESS FOR A PARTICULAR PURPOSE, ANY WARRANTY AGAINST INTERFERENCE WITH YOUR ENJOYMENT OF THE SOFTWARE OR ANY WARRANTY OF TITLE OR NON-INFRINGEMENT. THERE IS NO WARRANTY THAT THIS SOFTWARE WILL FULFILL ANY OF YOUR PARTICULAR PURPOSES OR NEEDS. ALSO, YOU MUST PASS THIS DISCLAIMER ON WHENEVER YOU DISTRIBUTE THE SOFTWARE OR DERIVATIVE WORKS.
|
||||||
|
# 6. THAT NEITHER NTUITIVE NOR NTU NOR ANY CONTRIBUTOR TO THE SOFTWARE WILL BE LIABLE FOR ANY DAMAGES RELATED TO THE SOFTWARE OR THIS NTUITIVE-LA, INCLUDING DIRECT, INDIRECT, SPECIAL, CONSEQUENTIAL OR INCIDENTAL DAMAGES, TO THE MAXIMUM EXTENT THE LAW PERMITS, NO MATTER WHAT LEGAL THEORY IT IS BASED ON. ALSO, YOU MUST PASS THIS LIMITATION OF LIABILITY ON WHENEVER YOU DISTRIBUTE THE SOFTWARE OR DERIVATIVE WORKS.
|
||||||
|
# 7. That we have no duty of reasonable care or lack of negligence, and we are not obligated to (and will not) provide technical support for the Software.
|
||||||
|
# 8. That if you breach this NTUITIVE-LA or if you sue anyone over patents that you think may apply to or read on the Software or anyone's use of the Software, this NTUITIVE-LA (and your license and rights obtained herein) terminate automatically. Upon any such termination, you shall destroy all of your copies of the Software immediately. Sections 3, 4, 5, 6, 7, 8, 11 and 12 of this NTUITIVE-LA shall survive any termination of this NTUITIVE-LA.
|
||||||
|
# 9. That the patent rights, if any, granted to you in this NTUITIVE-LA only apply to the Software, not to any derivative works you make.
|
||||||
|
# 10. That the Software may be subject to U.S. export jurisdiction at the time it is licensed to you, and it may be subject to additional export or import laws in other places. You agree to comply with all such laws and regulations that may apply to the Software after delivery of the software to you.
|
||||||
|
# 11. That all rights not expressly granted to you in this NTUITIVE-LA are reserved.
|
||||||
|
# 12. That this NTUITIVE-LA shall be construed and controlled by the laws of the Republic of Singapore without regard to conflicts of law. If any provision of this NTUITIVE-LA shall be deemed unenforceable or contrary to law, the rest of this NTUITIVE-LA shall remain in full effect and interpreted in an enforceable manner that most nearly captures the intent of the original language.
|
||||||
|
#
|
||||||
|
# Copyright (c) NTUITIVE. All rights reserved.
|
||||||
|
|
||||||
|
import numpy as np
|
||||||
|
|
||||||
|
|
||||||
|
class ElasticNodes:
|
||||||
|
growable = None
|
||||||
|
prunable = None
|
||||||
|
|
||||||
|
data_mean = 0
|
||||||
|
data_standard_deviation = 0
|
||||||
|
data_variance = 0
|
||||||
|
|
||||||
|
number_samples_feed = 0
|
||||||
|
number_samples_layer = None
|
||||||
|
|
||||||
|
bias_mean = None
|
||||||
|
bias_variance = None
|
||||||
|
bias_standard_deviation = None
|
||||||
|
minimum_bias_mean = None
|
||||||
|
minimum_bias_standard_deviation = None
|
||||||
|
bias = None
|
||||||
|
|
||||||
|
var_mean = None
|
||||||
|
var_variance = None
|
||||||
|
var_standard_deviation = None
|
||||||
|
minimum_var_mean = None
|
||||||
|
minimum_var_standard_deviation = None
|
||||||
|
var = None
|
||||||
|
|
||||||
|
node_evolution = None
|
||||||
|
|
||||||
|
bias_gradient = None
|
||||||
|
bias_mean_net = None
|
||||||
|
var_mean_net = None
|
||||||
|
|
||||||
|
def __init__(self, number_hidden_layers=1):
|
||||||
|
nhl = number_hidden_layers # readability
|
||||||
|
|
||||||
|
self.number_samples_layer = np.zeros(nhl)
|
||||||
|
self.bias_mean = np.zeros(nhl)
|
||||||
|
self.bias_variance = np.zeros(nhl)
|
||||||
|
self.bias_standard_deviation = np.zeros(nhl)
|
||||||
|
self.minimum_bias_mean = np.ones(nhl) * np.inf
|
||||||
|
self.minimum_bias_standard_deviation = np.ones(nhl) * np.inf
|
||||||
|
self.BIAS = []
|
||||||
|
|
||||||
|
self.var_mean = np.zeros(nhl)
|
||||||
|
self.var_variance = np.zeros(nhl)
|
||||||
|
self.var_standard_deviation = np.zeros(nhl)
|
||||||
|
self.minimum_var_mean = np.ones(nhl) * np.inf
|
||||||
|
self.minimum_var_standard_deviation = np.ones(nhl) * np.inf
|
||||||
|
self.VAR = []
|
||||||
|
|
||||||
|
self.growable = np.ones(nhl) * False
|
||||||
|
self.prunable = []
|
||||||
|
|
||||||
|
for i in range(nhl):
|
||||||
|
self.prunable.append([-1])
|
||||||
|
|
||||||
|
|
||||||
|
|
||||||
54
LICENSE
54
LICENSE
|
|
@ -1,21 +1,33 @@
|
||||||
MIT License
|
# Marcus Vinicius Sousa Leite de Carvalho
|
||||||
|
# marcus.decarvalho@ntu.edu.sg
|
||||||
Copyright (c) 2021 ACDC-paper-double-review
|
# ivsucram@gmail.com
|
||||||
|
#
|
||||||
Permission is hereby granted, free of charge, to any person obtaining a copy
|
# NANYANG TECHNOLOGICAL UNIVERSITY - NTUITIVE PTE LTD Dual License Agreement
|
||||||
of this software and associated documentation files (the "Software"), to deal
|
# Non-Commercial Use Only
|
||||||
in the Software without restriction, including without limitation the rights
|
# This NTUITIVE License Agreement, including all exhibits ("NTUITIVE-LA") is a legal agreement between you and NTUITIVE (or “we”) located at 71 Nanyang Drive, NTU Innovation Centre, #01-109, Singapore 637722, a wholly owned subsidiary of Nanyang Technological University (“NTU”) for the software or data identified above, which may include source code, and any associated materials, text or speech files, associated media and "online" or electronic documentation and any updates we provide in our discretion (together, the "Software").
|
||||||
to use, copy, modify, merge, publish, distribute, sublicense, and/or sell
|
#
|
||||||
copies of the Software, and to permit persons to whom the Software is
|
# By installing, copying, or otherwise using this Software, found at https://github.com/Ivsucram/ATL_Matlab, you agree to be bound by the terms of this NTUITIVE-LA. If you do not agree, do not install copy or use the Software. The Software is protected by copyright and other intellectual property laws and is licensed, not sold. If you wish to obtain a commercial royalty bearing license to this software please contact us at marcus.decarvalho@ntu.edu.sg.
|
||||||
furnished to do so, subject to the following conditions:
|
#
|
||||||
|
# SCOPE OF RIGHTS:
|
||||||
The above copyright notice and this permission notice shall be included in all
|
# You may use, copy, reproduce, and distribute this Software for any non-commercial purpose, subject to the restrictions in this NTUITIVE-LA. Some purposes which can be non-commercial are teaching, academic research, public demonstrations and personal experimentation. You may also distribute this Software with books or other teaching materials, or publish the Software on websites, that are intended to teach the use of the Software for academic or other non-commercial purposes.
|
||||||
copies or substantial portions of the Software.
|
# You may not use or distribute this Software or any derivative works in any form for commercial purposes. Examples of commercial purposes would be running business operations, licensing, leasing, or selling the Software, distributing the Software for use with commercial products, using the Software in the creation or use of commercial products or any other activity which purpose is to procure a commercial gain to you or others.
|
||||||
|
# If the Software includes source code or data, you may create derivative works of such portions of the Software and distribute the modified Software for non-commercial purposes, as provided herein.
|
||||||
THE SOFTWARE IS PROVIDED "AS IS", WITHOUT WARRANTY OF ANY KIND, EXPRESS OR
|
# If you distribute the Software or any derivative works of the Software, you will distribute them under the same terms and conditions as in this license, and you will not grant other rights to the Software or derivative works that are different from those provided by this NTUITIVE-LA.
|
||||||
IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF MERCHANTABILITY,
|
# If you have created derivative works of the Software, and distribute such derivative works, you will cause the modified files to carry prominent notices so that recipients know that they are not receiving the original Software. Such notices must state: (i) that you have changed the Software; and (ii) the date of any changes.
|
||||||
FITNESS FOR A PARTICULAR PURPOSE AND NONINFRINGEMENT. IN NO EVENT SHALL THE
|
#
|
||||||
AUTHORS OR COPYRIGHT HOLDERS BE LIABLE FOR ANY CLAIM, DAMAGES OR OTHER
|
# You may not distribute this Software or any derivative works.
|
||||||
LIABILITY, WHETHER IN AN ACTION OF CONTRACT, TORT OR OTHERWISE, ARISING FROM,
|
# In return, we simply require that you agree:
|
||||||
OUT OF OR IN CONNECTION WITH THE SOFTWARE OR THE USE OR OTHER DEALINGS IN THE
|
# 1. That you will not remove any copyright or other notices from the Software.
|
||||||
SOFTWARE.
|
# 2. That if any of the Software is in binary format, you will not attempt to modify such portions of the Software, or to reverse engineer or decompile them, except and only to the extent authorized by applicable law.
|
||||||
|
# 3. That NTUITIVE is granted back, without any restrictions or limitations, a non-exclusive, perpetual, irrevocable, royalty-free, assignable and sub-licensable license, to reproduce, publicly perform or display, install, use, modify, post, distribute, make and have made, sell and transfer your modifications to and/or derivative works of the Software source code or data, for any purpose.
|
||||||
|
# 4. That any feedback about the Software provided by you to us is voluntarily given, and NTUITIVE shall be free to use the feedback as it sees fit without obligation or restriction of any kind, even if the feedback is designated by you as confidential.
|
||||||
|
# 5. THAT THE SOFTWARE COMES "AS IS", WITH NO WARRANTIES. THIS MEANS NO EXPRESS, IMPLIED OR STATUTORY WARRANTY, INCLUDING WITHOUT LIMITATION, WARRANTIES OF MERCHANTABILITY OR FITNESS FOR A PARTICULAR PURPOSE, ANY WARRANTY AGAINST INTERFERENCE WITH YOUR ENJOYMENT OF THE SOFTWARE OR ANY WARRANTY OF TITLE OR NON-INFRINGEMENT. THERE IS NO WARRANTY THAT THIS SOFTWARE WILL FULFILL ANY OF YOUR PARTICULAR PURPOSES OR NEEDS. ALSO, YOU MUST PASS THIS DISCLAIMER ON WHENEVER YOU DISTRIBUTE THE SOFTWARE OR DERIVATIVE WORKS.
|
||||||
|
# 6. THAT NEITHER NTUITIVE NOR NTU NOR ANY CONTRIBUTOR TO THE SOFTWARE WILL BE LIABLE FOR ANY DAMAGES RELATED TO THE SOFTWARE OR THIS NTUITIVE-LA, INCLUDING DIRECT, INDIRECT, SPECIAL, CONSEQUENTIAL OR INCIDENTAL DAMAGES, TO THE MAXIMUM EXTENT THE LAW PERMITS, NO MATTER WHAT LEGAL THEORY IT IS BASED ON. ALSO, YOU MUST PASS THIS LIMITATION OF LIABILITY ON WHENEVER YOU DISTRIBUTE THE SOFTWARE OR DERIVATIVE WORKS.
|
||||||
|
# 7. That we have no duty of reasonable care or lack of negligence, and we are not obligated to (and will not) provide technical support for the Software.
|
||||||
|
# 8. That if you breach this NTUITIVE-LA or if you sue anyone over patents that you think may apply to or read on the Software or anyone's use of the Software, this NTUITIVE-LA (and your license and rights obtained herein) terminate automatically. Upon any such termination, you shall destroy all of your copies of the Software immediately. Sections 3, 4, 5, 6, 7, 8, 11 and 12 of this NTUITIVE-LA shall survive any termination of this NTUITIVE-LA.
|
||||||
|
# 9. That the patent rights, if any, granted to you in this NTUITIVE-LA only apply to the Software, not to any derivative works you make.
|
||||||
|
# 10. That the Software may be subject to U.S. export jurisdiction at the time it is licensed to you, and it may be subject to additional export or import laws in other places. You agree to comply with all such laws and regulations that may apply to the Software after delivery of the software to you.
|
||||||
|
# 11. That all rights not expressly granted to you in this NTUITIVE-LA are reserved.
|
||||||
|
# 12. That this NTUITIVE-LA shall be construed and controlled by the laws of the Republic of Singapore without regard to conflicts of law. If any provision of this NTUITIVE-LA shall be deemed unenforceable or contrary to law, the rest of this NTUITIVE-LA shall remain in full effect and interpreted in an enforceable manner that most nearly captures the intent of the original language.
|
||||||
|
#
|
||||||
|
# Copyright (c) NTUITIVE. All rights reserved.
|
||||||
|
|
@ -0,0 +1,120 @@
|
||||||
|
# Marcus Vinicius Sousa Leite de Carvalho
|
||||||
|
# marcus.decarvalho@ntu.edu.sg
|
||||||
|
# ivsucram@gmail.com
|
||||||
|
#
|
||||||
|
# NANYANG TECHNOLOGICAL UNIVERSITY - NTUITIVE PTE LTD Dual License Agreement
|
||||||
|
# Non-Commercial Use Only
|
||||||
|
# This NTUITIVE License Agreement, including all exhibits ("NTUITIVE-LA") is a legal agreement between you and NTUITIVE (or “we”) located at 71 Nanyang Drive, NTU Innovation Centre, #01-109, Singapore 637722, a wholly owned subsidiary of Nanyang Technological University (“NTU”) for the software or data identified above, which may include source code, and any associated materials, text or speech files, associated media and "online" or electronic documentation and any updates we provide in our discretion (together, the "Software").
|
||||||
|
#
|
||||||
|
# By installing, copying, or otherwise using this Software, found at https://github.com/Ivsucram/ATL_Matlab, you agree to be bound by the terms of this NTUITIVE-LA. If you do not agree, do not install copy or use the Software. The Software is protected by copyright and other intellectual property laws and is licensed, not sold. If you wish to obtain a commercial royalty bearing license to this software please contact us at marcus.decarvalho@ntu.edu.sg.
|
||||||
|
#
|
||||||
|
# SCOPE OF RIGHTS:
|
||||||
|
# You may use, copy, reproduce, and distribute this Software for any non-commercial purpose, subject to the restrictions in this NTUITIVE-LA. Some purposes which can be non-commercial are teaching, academic research, public demonstrations and personal experimentation. You may also distribute this Software with books or other teaching materials, or publish the Software on websites, that are intended to teach the use of the Software for academic or other non-commercial purposes.
|
||||||
|
# You may not use or distribute this Software or any derivative works in any form for commercial purposes. Examples of commercial purposes would be running business operations, licensing, leasing, or selling the Software, distributing the Software for use with commercial products, using the Software in the creation or use of commercial products or any other activity which purpose is to procure a commercial gain to you or others.
|
||||||
|
# If the Software includes source code or data, you may create derivative works of such portions of the Software and distribute the modified Software for non-commercial purposes, as provided herein.
|
||||||
|
# If you distribute the Software or any derivative works of the Software, you will distribute them under the same terms and conditions as in this license, and you will not grant other rights to the Software or derivative works that are different from those provided by this NTUITIVE-LA.
|
||||||
|
# If you have created derivative works of the Software, and distribute such derivative works, you will cause the modified files to carry prominent notices so that recipients know that they are not receiving the original Software. Such notices must state: (i) that you have changed the Software; and (ii) the date of any changes.
|
||||||
|
#
|
||||||
|
# You may not distribute this Software or any derivative works.
|
||||||
|
# In return, we simply require that you agree:
|
||||||
|
# 1. That you will not remove any copyright or other notices from the Software.
|
||||||
|
# 2. That if any of the Software is in binary format, you will not attempt to modify such portions of the Software, or to reverse engineer or decompile them, except and only to the extent authorized by applicable law.
|
||||||
|
# 3. That NTUITIVE is granted back, without any restrictions or limitations, a non-exclusive, perpetual, irrevocable, royalty-free, assignable and sub-licensable license, to reproduce, publicly perform or display, install, use, modify, post, distribute, make and have made, sell and transfer your modifications to and/or derivative works of the Software source code or data, for any purpose.
|
||||||
|
# 4. That any feedback about the Software provided by you to us is voluntarily given, and NTUITIVE shall be free to use the feedback as it sees fit without obligation or restriction of any kind, even if the feedback is designated by you as confidential.
|
||||||
|
# 5. THAT THE SOFTWARE COMES "AS IS", WITH NO WARRANTIES. THIS MEANS NO EXPRESS, IMPLIED OR STATUTORY WARRANTY, INCLUDING WITHOUT LIMITATION, WARRANTIES OF MERCHANTABILITY OR FITNESS FOR A PARTICULAR PURPOSE, ANY WARRANTY AGAINST INTERFERENCE WITH YOUR ENJOYMENT OF THE SOFTWARE OR ANY WARRANTY OF TITLE OR NON-INFRINGEMENT. THERE IS NO WARRANTY THAT THIS SOFTWARE WILL FULFILL ANY OF YOUR PARTICULAR PURPOSES OR NEEDS. ALSO, YOU MUST PASS THIS DISCLAIMER ON WHENEVER YOU DISTRIBUTE THE SOFTWARE OR DERIVATIVE WORKS.
|
||||||
|
# 6. THAT NEITHER NTUITIVE NOR NTU NOR ANY CONTRIBUTOR TO THE SOFTWARE WILL BE LIABLE FOR ANY DAMAGES RELATED TO THE SOFTWARE OR THIS NTUITIVE-LA, INCLUDING DIRECT, INDIRECT, SPECIAL, CONSEQUENTIAL OR INCIDENTAL DAMAGES, TO THE MAXIMUM EXTENT THE LAW PERMITS, NO MATTER WHAT LEGAL THEORY IT IS BASED ON. ALSO, YOU MUST PASS THIS LIMITATION OF LIABILITY ON WHENEVER YOU DISTRIBUTE THE SOFTWARE OR DERIVATIVE WORKS.
|
||||||
|
# 7. That we have no duty of reasonable care or lack of negligence, and we are not obligated to (and will not) provide technical support for the Software.
|
||||||
|
# 8. That if you breach this NTUITIVE-LA or if you sue anyone over patents that you think may apply to or read on the Software or anyone's use of the Software, this NTUITIVE-LA (and your license and rights obtained herein) terminate automatically. Upon any such termination, you shall destroy all of your copies of the Software immediately. Sections 3, 4, 5, 6, 7, 8, 11 and 12 of this NTUITIVE-LA shall survive any termination of this NTUITIVE-LA.
|
||||||
|
# 9. That the patent rights, if any, granted to you in this NTUITIVE-LA only apply to the Software, not to any derivative works you make.
|
||||||
|
# 10. That the Software may be subject to U.S. export jurisdiction at the time it is licensed to you, and it may be subject to additional export or import laws in other places. You agree to comply with all such laws and regulations that may apply to the Software after delivery of the software to you.
|
||||||
|
# 11. That all rights not expressly granted to you in this NTUITIVE-LA are reserved.
|
||||||
|
# 12. That this NTUITIVE-LA shall be construed and controlled by the laws of the Republic of Singapore without regard to conflicts of law. If any provision of this NTUITIVE-LA shall be deemed unenforceable or contrary to law, the rest of this NTUITIVE-LA shall remain in full effect and interpreted in an enforceable manner that most nearly captures the intent of the original language.
|
||||||
|
#
|
||||||
|
# Copyright (c) NTUITIVE. All rights reserved.
|
||||||
|
|
||||||
|
import torch
|
||||||
|
import gensim.downloader as gensim_downloader
|
||||||
|
|
||||||
|
|
||||||
|
class MyWord2Vec:
|
||||||
|
def get(self):
|
||||||
|
return Word2Vec.instance().word2vec
|
||||||
|
|
||||||
|
def set(self, word2vec):
|
||||||
|
Word2Vec.instance().word2vec = word2vec
|
||||||
|
|
||||||
|
|
||||||
|
class Word2Vec:
|
||||||
|
class __Word2Vec:
|
||||||
|
def __init__(self, word2vec=None):
|
||||||
|
if word2vec:
|
||||||
|
self.word2vec = word2vec
|
||||||
|
else:
|
||||||
|
print('Downloading (if needed) and setting Word2Vec Google-News-300 from gensim')
|
||||||
|
print('This might take a while. Be patient...')
|
||||||
|
self.word2vec = gensim_downloader.load('word2vec-google-news-300')
|
||||||
|
print('Done!')
|
||||||
|
|
||||||
|
def __str__(self):
|
||||||
|
return repr(self) + self.word2vec
|
||||||
|
|
||||||
|
_instance = None
|
||||||
|
__instance = None
|
||||||
|
|
||||||
|
def __init__(self):
|
||||||
|
raise RuntimeError('Call instance() instead')
|
||||||
|
|
||||||
|
@classmethod
|
||||||
|
def instance(cls, word2vec=None):
|
||||||
|
if cls._instance is None:
|
||||||
|
cls._instance = cls.__new__(cls)
|
||||||
|
if word2vec is None:
|
||||||
|
cls.__instance = Word2Vec.__Word2Vec()
|
||||||
|
else:
|
||||||
|
cls.__instance = Word2Vec.__Word2Vec(word2vec)
|
||||||
|
return cls._instance
|
||||||
|
|
||||||
|
def __getattr__(self, name):
|
||||||
|
return getattr(self.__instance, name)
|
||||||
|
|
||||||
|
|
||||||
|
class MyDevice:
|
||||||
|
def get(self):
|
||||||
|
return TorchDevice.instance().device
|
||||||
|
|
||||||
|
def set(self, is_gpu=True):
|
||||||
|
if is_gpu:
|
||||||
|
TorchDevice.instance().device = torch.device("cuda:0" if torch.cuda.is_available() else "cpu")
|
||||||
|
else:
|
||||||
|
TorchDevice.instance().device = torch.device("cpu")
|
||||||
|
|
||||||
|
|
||||||
|
class TorchDevice:
|
||||||
|
class __TorchDevice:
|
||||||
|
def __init__(self, device: torch.device = None):
|
||||||
|
if device:
|
||||||
|
self.device = device
|
||||||
|
else:
|
||||||
|
self.device = torch.device("cuda:0" if torch.cuda.is_available() else "cpu")
|
||||||
|
|
||||||
|
def __str__(self):
|
||||||
|
return repr(self) + self.device
|
||||||
|
|
||||||
|
_instance = None
|
||||||
|
__instance = None
|
||||||
|
|
||||||
|
def __init__(self):
|
||||||
|
raise RuntimeError('Call instance() instead')
|
||||||
|
|
||||||
|
@classmethod
|
||||||
|
def instance(cls, device: torch.device = None):
|
||||||
|
if cls._instance is None:
|
||||||
|
cls._instance = cls.__new__(cls)
|
||||||
|
if device is None:
|
||||||
|
cls.__instance = TorchDevice.__TorchDevice()
|
||||||
|
else:
|
||||||
|
cls.__instance = TorchDevice.__TorchDevice(device)
|
||||||
|
return cls._instance
|
||||||
|
|
||||||
|
def __getattr__(self, name):
|
||||||
|
return getattr(self.__instance, name)
|
||||||
|
|
@ -0,0 +1,64 @@
|
||||||
|
# Marcus Vinicius Sousa Leite de Carvalho
|
||||||
|
# marcus.decarvalho@ntu.edu.sg
|
||||||
|
# ivsucram@gmail.com
|
||||||
|
#
|
||||||
|
# NANYANG TECHNOLOGICAL UNIVERSITY - NTUITIVE PTE LTD Dual License Agreement
|
||||||
|
# Non-Commercial Use Only
|
||||||
|
# This NTUITIVE License Agreement, including all exhibits ("NTUITIVE-LA") is a legal agreement between you and NTUITIVE (or “we”) located at 71 Nanyang Drive, NTU Innovation Centre, #01-109, Singapore 637722, a wholly owned subsidiary of Nanyang Technological University (“NTU”) for the software or data identified above, which may include source code, and any associated materials, text or speech files, associated media and "online" or electronic documentation and any updates we provide in our discretion (together, the "Software").
|
||||||
|
#
|
||||||
|
# By installing, copying, or otherwise using this Software, found at https://github.com/Ivsucram/ATL_Matlab, you agree to be bound by the terms of this NTUITIVE-LA. If you do not agree, do not install copy or use the Software. The Software is protected by copyright and other intellectual property laws and is licensed, not sold. If you wish to obtain a commercial royalty bearing license to this software please contact us at marcus.decarvalho@ntu.edu.sg.
|
||||||
|
#
|
||||||
|
# SCOPE OF RIGHTS:
|
||||||
|
# You may use, copy, reproduce, and distribute this Software for any non-commercial purpose, subject to the restrictions in this NTUITIVE-LA. Some purposes which can be non-commercial are teaching, academic research, public demonstrations and personal experimentation. You may also distribute this Software with books or other teaching materials, or publish the Software on websites, that are intended to teach the use of the Software for academic or other non-commercial purposes.
|
||||||
|
# You may not use or distribute this Software or any derivative works in any form for commercial purposes. Examples of commercial purposes would be running business operations, licensing, leasing, or selling the Software, distributing the Software for use with commercial products, using the Software in the creation or use of commercial products or any other activity which purpose is to procure a commercial gain to you or others.
|
||||||
|
# If the Software includes source code or data, you may create derivative works of such portions of the Software and distribute the modified Software for non-commercial purposes, as provided herein.
|
||||||
|
# If you distribute the Software or any derivative works of the Software, you will distribute them under the same terms and conditions as in this license, and you will not grant other rights to the Software or derivative works that are different from those provided by this NTUITIVE-LA.
|
||||||
|
# If you have created derivative works of the Software, and distribute such derivative works, you will cause the modified files to carry prominent notices so that recipients know that they are not receiving the original Software. Such notices must state: (i) that you have changed the Software; and (ii) the date of any changes.
|
||||||
|
#
|
||||||
|
# You may not distribute this Software or any derivative works.
|
||||||
|
# In return, we simply require that you agree:
|
||||||
|
# 1. That you will not remove any copyright or other notices from the Software.
|
||||||
|
# 2. That if any of the Software is in binary format, you will not attempt to modify such portions of the Software, or to reverse engineer or decompile them, except and only to the extent authorized by applicable law.
|
||||||
|
# 3. That NTUITIVE is granted back, without any restrictions or limitations, a non-exclusive, perpetual, irrevocable, royalty-free, assignable and sub-licensable license, to reproduce, publicly perform or display, install, use, modify, post, distribute, make and have made, sell and transfer your modifications to and/or derivative works of the Software source code or data, for any purpose.
|
||||||
|
# 4. That any feedback about the Software provided by you to us is voluntarily given, and NTUITIVE shall be free to use the feedback as it sees fit without obligation or restriction of any kind, even if the feedback is designated by you as confidential.
|
||||||
|
# 5. THAT THE SOFTWARE COMES "AS IS", WITH NO WARRANTIES. THIS MEANS NO EXPRESS, IMPLIED OR STATUTORY WARRANTY, INCLUDING WITHOUT LIMITATION, WARRANTIES OF MERCHANTABILITY OR FITNESS FOR A PARTICULAR PURPOSE, ANY WARRANTY AGAINST INTERFERENCE WITH YOUR ENJOYMENT OF THE SOFTWARE OR ANY WARRANTY OF TITLE OR NON-INFRINGEMENT. THERE IS NO WARRANTY THAT THIS SOFTWARE WILL FULFILL ANY OF YOUR PARTICULAR PURPOSES OR NEEDS. ALSO, YOU MUST PASS THIS DISCLAIMER ON WHENEVER YOU DISTRIBUTE THE SOFTWARE OR DERIVATIVE WORKS.
|
||||||
|
# 6. THAT NEITHER NTUITIVE NOR NTU NOR ANY CONTRIBUTOR TO THE SOFTWARE WILL BE LIABLE FOR ANY DAMAGES RELATED TO THE SOFTWARE OR THIS NTUITIVE-LA, INCLUDING DIRECT, INDIRECT, SPECIAL, CONSEQUENTIAL OR INCIDENTAL DAMAGES, TO THE MAXIMUM EXTENT THE LAW PERMITS, NO MATTER WHAT LEGAL THEORY IT IS BASED ON. ALSO, YOU MUST PASS THIS LIMITATION OF LIABILITY ON WHENEVER YOU DISTRIBUTE THE SOFTWARE OR DERIVATIVE WORKS.
|
||||||
|
# 7. That we have no duty of reasonable care or lack of negligence, and we are not obligated to (and will not) provide technical support for the Software.
|
||||||
|
# 8. That if you breach this NTUITIVE-LA or if you sue anyone over patents that you think may apply to or read on the Software or anyone's use of the Software, this NTUITIVE-LA (and your license and rights obtained herein) terminate automatically. Upon any such termination, you shall destroy all of your copies of the Software immediately. Sections 3, 4, 5, 6, 7, 8, 11 and 12 of this NTUITIVE-LA shall survive any termination of this NTUITIVE-LA.
|
||||||
|
# 9. That the patent rights, if any, granted to you in this NTUITIVE-LA only apply to the Software, not to any derivative works you make.
|
||||||
|
# 10. That the Software may be subject to U.S. export jurisdiction at the time it is licensed to you, and it may be subject to additional export or import laws in other places. You agree to comply with all such laws and regulations that may apply to the Software after delivery of the software to you.
|
||||||
|
# 11. That all rights not expressly granted to you in this NTUITIVE-LA are reserved.
|
||||||
|
# 12. That this NTUITIVE-LA shall be construed and controlled by the laws of the Republic of Singapore without regard to conflicts of law. If any provision of this NTUITIVE-LA shall be deemed unenforceable or contrary to law, the rest of this NTUITIVE-LA shall remain in full effect and interpreted in an enforceable manner that most nearly captures the intent of the original language.
|
||||||
|
#
|
||||||
|
# Copyright (c) NTUITIVE. All rights reserved.
|
||||||
|
|
||||||
|
import math
|
||||||
|
import torch
|
||||||
|
|
||||||
|
|
||||||
|
class MyUtil:
|
||||||
|
def __init__(self):
|
||||||
|
pass
|
||||||
|
|
||||||
|
@staticmethod
|
||||||
|
def recursive_mean_standard_deviation(x, old_mean, old_variance, number_samples):
|
||||||
|
mean = old_mean + (x - old_mean) / number_samples
|
||||||
|
var = old_variance + (x - old_mean) * (x - mean)
|
||||||
|
return mean, var, torch.sqrt(var/number_samples)
|
||||||
|
|
||||||
|
@staticmethod
|
||||||
|
def probit(mean, standard_deviation):
|
||||||
|
p = (1 + math.pi * (standard_deviation ** 2) / 8)
|
||||||
|
return mean / torch.sqrt(p)
|
||||||
|
|
||||||
|
@staticmethod
|
||||||
|
def norm_1(x):
|
||||||
|
return torch.norm(x, 1)
|
||||||
|
|
||||||
|
@staticmethod
|
||||||
|
def norm_2(x):
|
||||||
|
return torch.norm(x, 2)
|
||||||
|
|
||||||
|
@staticmethod
|
||||||
|
def frobenius_norm(x):
|
||||||
|
return torch.norm(x, 'fro')
|
||||||
|
|
@ -0,0 +1,579 @@
|
||||||
|
# Marcus Vinicius Sousa Leite de Carvalho
|
||||||
|
# marcus.decarvalho@ntu.edu.sg
|
||||||
|
# ivsucram@gmail.com
|
||||||
|
#
|
||||||
|
# NANYANG TECHNOLOGICAL UNIVERSITY - NTUITIVE PTE LTD Dual License Agreement
|
||||||
|
# Non-Commercial Use Only
|
||||||
|
# This NTUITIVE License Agreement, including all exhibits ("NTUITIVE-LA") is a legal agreement between you and NTUITIVE (or “we”) located at 71 Nanyang Drive, NTU Innovation Centre, #01-109, Singapore 637722, a wholly owned subsidiary of Nanyang Technological University (“NTU”) for the software or data identified above, which may include source code, and any associated materials, text or speech files, associated media and "online" or electronic documentation and any updates we provide in our discretion (together, the "Software").
|
||||||
|
#
|
||||||
|
# By installing, copying, or otherwise using this Software, found at https://github.com/Ivsucram/ATL_Matlab, you agree to be bound by the terms of this NTUITIVE-LA. If you do not agree, do not install copy or use the Software. The Software is protected by copyright and other intellectual property laws and is licensed, not sold. If you wish to obtain a commercial royalty bearing license to this software please contact us at marcus.decarvalho@ntu.edu.sg.
|
||||||
|
#
|
||||||
|
# SCOPE OF RIGHTS:
|
||||||
|
# You may use, copy, reproduce, and distribute this Software for any non-commercial purpose, subject to the restrictions in this NTUITIVE-LA. Some purposes which can be non-commercial are teaching, academic research, public demonstrations and personal experimentation. You may also distribute this Software with books or other teaching materials, or publish the Software on websites, that are intended to teach the use of the Software for academic or other non-commercial purposes.
|
||||||
|
# You may not use or distribute this Software or any derivative works in any form for commercial purposes. Examples of commercial purposes would be running business operations, licensing, leasing, or selling the Software, distributing the Software for use with commercial products, using the Software in the creation or use of commercial products or any other activity which purpose is to procure a commercial gain to you or others.
|
||||||
|
# If the Software includes source code or data, you may create derivative works of such portions of the Software and distribute the modified Software for non-commercial purposes, as provided herein.
|
||||||
|
# If you distribute the Software or any derivative works of the Software, you will distribute them under the same terms and conditions as in this license, and you will not grant other rights to the Software or derivative works that are different from those provided by this NTUITIVE-LA.
|
||||||
|
# If you have created derivative works of the Software, and distribute such derivative works, you will cause the modified files to carry prominent notices so that recipients know that they are not receiving the original Software. Such notices must state: (i) that you have changed the Software; and (ii) the date of any changes.
|
||||||
|
#
|
||||||
|
# You may not distribute this Software or any derivative works.
|
||||||
|
# In return, we simply require that you agree:
|
||||||
|
# 1. That you will not remove any copyright or other notices from the Software.
|
||||||
|
# 2. That if any of the Software is in binary format, you will not attempt to modify such portions of the Software, or to reverse engineer or decompile them, except and only to the extent authorized by applicable law.
|
||||||
|
# 3. That NTUITIVE is granted back, without any restrictions or limitations, a non-exclusive, perpetual, irrevocable, royalty-free, assignable and sub-licensable license, to reproduce, publicly perform or display, install, use, modify, post, distribute, make and have made, sell and transfer your modifications to and/or derivative works of the Software source code or data, for any purpose.
|
||||||
|
# 4. That any feedback about the Software provided by you to us is voluntarily given, and NTUITIVE shall be free to use the feedback as it sees fit without obligation or restriction of any kind, even if the feedback is designated by you as confidential.
|
||||||
|
# 5. THAT THE SOFTWARE COMES "AS IS", WITH NO WARRANTIES. THIS MEANS NO EXPRESS, IMPLIED OR STATUTORY WARRANTY, INCLUDING WITHOUT LIMITATION, WARRANTIES OF MERCHANTABILITY OR FITNESS FOR A PARTICULAR PURPOSE, ANY WARRANTY AGAINST INTERFERENCE WITH YOUR ENJOYMENT OF THE SOFTWARE OR ANY WARRANTY OF TITLE OR NON-INFRINGEMENT. THERE IS NO WARRANTY THAT THIS SOFTWARE WILL FULFILL ANY OF YOUR PARTICULAR PURPOSES OR NEEDS. ALSO, YOU MUST PASS THIS DISCLAIMER ON WHENEVER YOU DISTRIBUTE THE SOFTWARE OR DERIVATIVE WORKS.
|
||||||
|
# 6. THAT NEITHER NTUITIVE NOR NTU NOR ANY CONTRIBUTOR TO THE SOFTWARE WILL BE LIABLE FOR ANY DAMAGES RELATED TO THE SOFTWARE OR THIS NTUITIVE-LA, INCLUDING DIRECT, INDIRECT, SPECIAL, CONSEQUENTIAL OR INCIDENTAL DAMAGES, TO THE MAXIMUM EXTENT THE LAW PERMITS, NO MATTER WHAT LEGAL THEORY IT IS BASED ON. ALSO, YOU MUST PASS THIS LIMITATION OF LIABILITY ON WHENEVER YOU DISTRIBUTE THE SOFTWARE OR DERIVATIVE WORKS.
|
||||||
|
# 7. That we have no duty of reasonable care or lack of negligence, and we are not obligated to (and will not) provide technical support for the Software.
|
||||||
|
# 8. That if you breach this NTUITIVE-LA or if you sue anyone over patents that you think may apply to or read on the Software or anyone's use of the Software, this NTUITIVE-LA (and your license and rights obtained herein) terminate automatically. Upon any such termination, you shall destroy all of your copies of the Software immediately. Sections 3, 4, 5, 6, 7, 8, 11 and 12 of this NTUITIVE-LA shall survive any termination of this NTUITIVE-LA.
|
||||||
|
# 9. That the patent rights, if any, granted to you in this NTUITIVE-LA only apply to the Software, not to any derivative works you make.
|
||||||
|
# 10. That the Software may be subject to U.S. export jurisdiction at the time it is licensed to you, and it may be subject to additional export or import laws in other places. You agree to comply with all such laws and regulations that may apply to the Software after delivery of the software to you.
|
||||||
|
# 11. That all rights not expressly granted to you in this NTUITIVE-LA are reserved.
|
||||||
|
# 12. That this NTUITIVE-LA shall be construed and controlled by the laws of the Republic of Singapore without regard to conflicts of law. If any provision of this NTUITIVE-LA shall be deemed unenforceable or contrary to law, the rest of this NTUITIVE-LA shall remain in full effect and interpreted in an enforceable manner that most nearly captures the intent of the original language.
|
||||||
|
#
|
||||||
|
# Copyright (c) NTUITIVE. All rights reserved.
|
||||||
|
|
||||||
|
from MyUtil import MyUtil as MyUtil
|
||||||
|
from ElasticNodes import ElasticNodes
|
||||||
|
from MySingletons import MyDevice
|
||||||
|
|
||||||
|
import numpy as np
|
||||||
|
import torch
|
||||||
|
|
||||||
|
|
||||||
|
# class ReverseLayerFunction(torch.autograd.Function):
|
||||||
|
# @staticmethod
|
||||||
|
# def forward(self, x, alpha=1.0):
|
||||||
|
# self.alpha = alpha
|
||||||
|
#
|
||||||
|
# return x.view_as(x)
|
||||||
|
#
|
||||||
|
# @staticmethod
|
||||||
|
# def backward(self, grad_output):
|
||||||
|
# output = grad_output.neg() * self.alpha
|
||||||
|
#
|
||||||
|
# return output, None
|
||||||
|
|
||||||
|
|
||||||
|
class NeuralNetwork(ElasticNodes):
|
||||||
|
layers = None
|
||||||
|
layer_value = None
|
||||||
|
output_layer_value = None
|
||||||
|
|
||||||
|
weight = None
|
||||||
|
bias = None
|
||||||
|
momentum = None
|
||||||
|
bias_momentum = None
|
||||||
|
|
||||||
|
output_weight = None
|
||||||
|
output_bias = None
|
||||||
|
output_momentum = None
|
||||||
|
output_bias_momentum = None
|
||||||
|
|
||||||
|
activation_function = None
|
||||||
|
output_activation_function = None
|
||||||
|
loss_function = None
|
||||||
|
|
||||||
|
learning_rate = 0.01
|
||||||
|
momentum_rate = 0.95
|
||||||
|
|
||||||
|
error_value = None
|
||||||
|
loss_value = None
|
||||||
|
classification_rate = None
|
||||||
|
misclassified = None
|
||||||
|
|
||||||
|
output_beta = None
|
||||||
|
output_beta_decreasing_factor = None
|
||||||
|
|
||||||
|
__Eh = None
|
||||||
|
__Eh2 = None
|
||||||
|
|
||||||
|
@property
|
||||||
|
def number_hidden_layers(self):
|
||||||
|
return len(self.layers) - 2
|
||||||
|
|
||||||
|
@property
|
||||||
|
def input_size(self):
|
||||||
|
return self.layers[0]
|
||||||
|
|
||||||
|
@property
|
||||||
|
def output_size(self):
|
||||||
|
return self.layers[-1]
|
||||||
|
|
||||||
|
@property
|
||||||
|
def output(self):
|
||||||
|
return self.output_layer_value
|
||||||
|
|
||||||
|
@property
|
||||||
|
def raw_output(self):
|
||||||
|
return torch.max(self.output, axis=1)
|
||||||
|
|
||||||
|
@property
|
||||||
|
def outputed_classes(self):
|
||||||
|
return torch.argmax(self.output, axis=1)
|
||||||
|
|
||||||
|
@property
|
||||||
|
def residual_error(self):
|
||||||
|
return 1 - self.raw_output.values
|
||||||
|
|
||||||
|
ACTIVATION_FUNCTION_AFFINE = 1
|
||||||
|
ACTIVATION_FUNCTION_SIGMOID = ACTIVATION_FUNCTION_AFFINE + 1
|
||||||
|
ACTIVATION_FUNCTION_TANH = ACTIVATION_FUNCTION_SIGMOID + 1
|
||||||
|
ACTIVATION_FUNCTION_RELU = ACTIVATION_FUNCTION_TANH + 1
|
||||||
|
ACTIVATION_FUNCTION_LINEAR = ACTIVATION_FUNCTION_RELU + 1
|
||||||
|
ACTIVATION_FUNCTION_SOFTMAX = ACTIVATION_FUNCTION_LINEAR + 1
|
||||||
|
ACTIVATION_FUNCTION_REVERSE_LAYER = ACTIVATION_FUNCTION_SOFTMAX + 1
|
||||||
|
|
||||||
|
LOSS_FUNCTION_MSE = ACTIVATION_FUNCTION_REVERSE_LAYER + 1
|
||||||
|
LOSS_FUNCTION_CROSS_ENTROPY = LOSS_FUNCTION_MSE + 1
|
||||||
|
|
||||||
|
PRUNE_NODE_STRATEGY_SINGLE = LOSS_FUNCTION_CROSS_ENTROPY + 1
|
||||||
|
PRUNE_NODE_STRATEGY_MULTIPLE = PRUNE_NODE_STRATEGY_SINGLE + 1
|
||||||
|
|
||||||
|
def __init__(self, layers: list, init_weights: bool = True):
|
||||||
|
self.layers = layers
|
||||||
|
|
||||||
|
self.weight = []
|
||||||
|
self.bias = []
|
||||||
|
self.momentum = []
|
||||||
|
self.bias_momentum = []
|
||||||
|
self.activation_function = []
|
||||||
|
|
||||||
|
for i in range(self.number_hidden_layers):
|
||||||
|
nodes_before = layers[i]
|
||||||
|
nodes_after = layers[i + 1]
|
||||||
|
|
||||||
|
if init_weights:
|
||||||
|
self.weight.append(self.xavier_weight_initialization(nodes_after, nodes_before))
|
||||||
|
self.bias.append(self.xavier_weight_initialization(1, nodes_after))
|
||||||
|
self.momentum.append(torch.zeros(self.weight[i].shape, dtype=torch.float, device=MyDevice().get()))
|
||||||
|
self.bias_momentum.append(torch.zeros(self.bias[i].shape, dtype=torch.float, device=MyDevice().get()))
|
||||||
|
else:
|
||||||
|
self.weight.append(None)
|
||||||
|
self.bias.append(None)
|
||||||
|
self.momentum.append(None)
|
||||||
|
self.bias_momentum.append(None)
|
||||||
|
self.momentum_rate = 0
|
||||||
|
|
||||||
|
self.activation_function.append(self.ACTIVATION_FUNCTION_SIGMOID)
|
||||||
|
|
||||||
|
if init_weights:
|
||||||
|
nodes_before = layers[-2]
|
||||||
|
nodes_after = layers[-1]
|
||||||
|
|
||||||
|
self.output_weight = self.xavier_weight_initialization(nodes_after, nodes_before)
|
||||||
|
self.output_bias = self.xavier_weight_initialization(1, nodes_after)
|
||||||
|
self.output_momentum = torch.zeros(self.output_weight.shape, dtype=torch.float, device=MyDevice().get())
|
||||||
|
self.output_bias_momentum = torch.zeros(self.output_bias.shape, dtype=torch.float, device=MyDevice().get())
|
||||||
|
else:
|
||||||
|
self.output_weight = None
|
||||||
|
self.output_bias = None
|
||||||
|
self.output_momentum = None
|
||||||
|
self.output_bias_momentum = None
|
||||||
|
self.momentum_rate = 0
|
||||||
|
|
||||||
|
self.output_activation_function = self.ACTIVATION_FUNCTION_SOFTMAX
|
||||||
|
self.loss_function = self.LOSS_FUNCTION_CROSS_ENTROPY
|
||||||
|
|
||||||
|
ElasticNodes.__init__(self, len(self.layers))
|
||||||
|
|
||||||
|
##### Weight initializations #####
|
||||||
|
|
||||||
|
def xavier_weight_initialization(self, n_out: int, n_in: int, uniform: bool = False):
|
||||||
|
if uniform:
|
||||||
|
return torch.nn.init.xavier_uniform(tensor=torch.zeros(int(n_out), int(n_in), dtype=torch.float,
|
||||||
|
requires_grad=True, device=MyDevice().get()))
|
||||||
|
return torch.nn.init.xavier_normal_(tensor=torch.zeros(int(n_out), int(n_in), dtype=torch.float,
|
||||||
|
requires_grad=True, device=MyDevice().get()))
|
||||||
|
|
||||||
|
def he_weight_initialization(self, n_out, n_in, shape=None):
|
||||||
|
#TODO
|
||||||
|
mean = 0.0
|
||||||
|
sigma = np.sqrt(2 / n_in)
|
||||||
|
if shape is None:
|
||||||
|
shape = (n_out, n_in)
|
||||||
|
return np.random.normal(mean, sigma, shape)
|
||||||
|
|
||||||
|
##### Noise #####
|
||||||
|
|
||||||
|
def masking_noise(self, x: torch.tensor, noise_ratio: float = 0.0):
|
||||||
|
return x.detach().masked_fill(torch.rand(x.shape, device=MyDevice().get()) <= noise_ratio, 0)
|
||||||
|
|
||||||
|
##### Activation functions #####
|
||||||
|
|
||||||
|
@staticmethod
|
||||||
|
def sigmoid(z: torch.tensor):
|
||||||
|
return torch.sigmoid(z)
|
||||||
|
|
||||||
|
@staticmethod
|
||||||
|
def tanh(z):
|
||||||
|
return torch.tanh(z)
|
||||||
|
|
||||||
|
@staticmethod
|
||||||
|
def relu(z):
|
||||||
|
return torch.nn.functional.relu(z)
|
||||||
|
|
||||||
|
@staticmethod
|
||||||
|
def linear(layer_value: torch.tensor, weight: torch.tensor, bias: torch.tensor):
|
||||||
|
return torch.nn.functional.linear(layer_value, weight, bias)
|
||||||
|
|
||||||
|
@staticmethod
|
||||||
|
def softmax(z, axis: int = 1):
|
||||||
|
return torch.nn.functional.softmax(z, dim=axis)
|
||||||
|
|
||||||
|
def reset_grad(self):
|
||||||
|
for i in range(self.number_hidden_layers):
|
||||||
|
self.weight[i] = self.weight[i].detach()
|
||||||
|
self.bias[i] = self.bias[i].detach()
|
||||||
|
self.weight[i].requires_grad = True
|
||||||
|
self.bias[i].requires_grad = True
|
||||||
|
|
||||||
|
self.output_weight = self.output_weight.detach()
|
||||||
|
self.output_bias = self.output_bias.detach()
|
||||||
|
self.output_weight.requires_grad = True
|
||||||
|
self.output_bias.requires_grad = True
|
||||||
|
|
||||||
|
def feedforward(self, x: torch.Tensor, y: torch.Tensor, train: bool = False):
|
||||||
|
return self.forward_pass(x, train=train).calculate_error(y)
|
||||||
|
|
||||||
|
def backpropagate(self):
|
||||||
|
self.loss_value.backward()
|
||||||
|
|
||||||
|
return self
|
||||||
|
|
||||||
|
def test(self, x: torch.Tensor, y: torch.Tensor, is_beta_updatable: bool = False):
|
||||||
|
self.feedforward(x=x, y=y)
|
||||||
|
|
||||||
|
m = y.shape[0]
|
||||||
|
|
||||||
|
true_classes = torch.argmax(y, axis=1)
|
||||||
|
self.misclassified = torch.sum(torch.ne(self.outputed_classes, true_classes)).item()
|
||||||
|
self.classification_rate = 1 - self.misclassified / m
|
||||||
|
|
||||||
|
if is_beta_updatable:
|
||||||
|
class_label = self.output_layer_value.max(axis=2)
|
||||||
|
for i in range(m):
|
||||||
|
if self.true_classes[i] == class_label[i]:
|
||||||
|
self.output_beta = np.max(self.output_beta * self.output_beta_decreasing_factor, 0)
|
||||||
|
self.output_beta_decreasing_factor = np.max(self.output_beta_decreasing_factor - 0.01, 0)
|
||||||
|
else:
|
||||||
|
self.output_beta = max(self.output_beta * (1 + self.output_beta_decreasing_factor), 1)
|
||||||
|
self.output_beta_decreasing_factor = max(self.output_beta_decreasing_factor + 0.01, 1)
|
||||||
|
|
||||||
|
return self
|
||||||
|
|
||||||
|
def train(self, x: torch.Tensor, y: torch.Tensor, weight_no: int = None, is_neg_grad: bool = False):
|
||||||
|
self.feedforward(x=x, y=y, train=True).backpropagate()
|
||||||
|
|
||||||
|
if weight_no is None:
|
||||||
|
for weight_no in range(self.number_hidden_layers, -1, -1):
|
||||||
|
self.update_weight(weight_no=weight_no, is_neg_grad=is_neg_grad)
|
||||||
|
else:
|
||||||
|
self.update_weight(weight_no=weight_no, is_neg_grad=is_neg_grad)
|
||||||
|
|
||||||
|
def update_weight(self, weight_no: int, is_neg_grad: bool = False):
|
||||||
|
if weight_no >= self.number_hidden_layers:
|
||||||
|
dW: torch.Tensor = self.learning_rate * self.output_weight.grad
|
||||||
|
db: torch.Tensor = self.learning_rate * self.output_bias.grad
|
||||||
|
if self.momentum_rate > 0:
|
||||||
|
self.output_momentum: torch.Tensor = self.momentum_rate * self.output_momentum + dW
|
||||||
|
self.output_bias_momentum: torch.Tensor = self.momentum_rate * self.output_bias_momentum + db
|
||||||
|
dW: torch.Tensor = self.output_momentum
|
||||||
|
db: torch.Tensor = self.output_bias_momentum
|
||||||
|
if is_neg_grad:
|
||||||
|
self.output_weight: torch.Tensor = self.output_weight - dW.neg()
|
||||||
|
self.output_bias: torch.Tensor = self.output_bias - db.neg()
|
||||||
|
else:
|
||||||
|
self.output_weight: torch.Tensor = self.output_weight - dW
|
||||||
|
self.output_bias: torch.Tensor = self.output_bias - db
|
||||||
|
else:
|
||||||
|
dW: torch.Tensor = self.learning_rate * self.weight[weight_no].grad
|
||||||
|
db: torch.Tensor = self.learning_rate * self.bias[weight_no].grad
|
||||||
|
if self.momentum_rate > 0:
|
||||||
|
self.momentum[weight_no]: torch.Tensor = self.momentum_rate * self.momentum[weight_no] + dW
|
||||||
|
self.bias_momentum[weight_no]: torch.Tensor = self.momentum_rate * self.bias_momentum[weight_no] + db
|
||||||
|
dW: torch.Tensor = self.momentum[weight_no]
|
||||||
|
db: torch.Tensor = self.bias_momentum[weight_no]
|
||||||
|
if is_neg_grad:
|
||||||
|
self.weight[weight_no]: torch.Tensor = self.weight[weight_no] - dW.neg()
|
||||||
|
self.bias[weight_no]: torch.Tensor = self.bias[weight_no] - db.neg()
|
||||||
|
else:
|
||||||
|
self.weight[weight_no]: torch.Tensor = self.weight[weight_no] - dW
|
||||||
|
self.bias[weight_no]: torch.Tensor = self.bias[weight_no] - db
|
||||||
|
|
||||||
|
def forward_pass(self, x: torch.Tensor, train: bool = False):
|
||||||
|
if train:
|
||||||
|
self.reset_grad()
|
||||||
|
self.layer_value = []
|
||||||
|
self.layer_value.append(x)
|
||||||
|
|
||||||
|
for i in range(self.number_hidden_layers):
|
||||||
|
if self.activation_function[i] == self.ACTIVATION_FUNCTION_AFFINE:
|
||||||
|
self.layer_value.append(self.linear(self.layer_value[i], self.weight[i], self.bias[i]))
|
||||||
|
elif self.activation_function[i] == self.ACTIVATION_FUNCTION_SIGMOID:
|
||||||
|
self.layer_value.append(self.sigmoid(self.linear(self.layer_value[i], self.weight[i], self.bias[i])))
|
||||||
|
elif self.activation_function[i] == self.ACTIVATION_FUNCTION_TANH:
|
||||||
|
self.layer_value.append(self.tanh(self.linear(self.layer_value[i], self.weight[i], self.bias[i])))
|
||||||
|
elif self.activation_function[i] == self.ACTIVATION_FUNCTION_RELU:
|
||||||
|
self.layer_value.append(self.relu(self.linear(self.layer_value[i], self.weight[i], self.bias[i])))
|
||||||
|
elif self.activation_function[i] == self.ACTIVATION_FUNCTION_LINEAR:
|
||||||
|
raise TypeError('Not implemented')
|
||||||
|
elif self.activation_function[i] == self.ACTIVATION_FUNCTION_SOFTMAX:
|
||||||
|
self.layer_value.append(self.softmax(self.linear(self.layer_value[i], self.weight[i], self.bias[i])))
|
||||||
|
elif self.activation_function[i] == self.ACTIVATION_FUNCTION_REVERSE_LAYER:
|
||||||
|
self.layer_value.append(self.reverse_layer(self.layer_value[i]))
|
||||||
|
|
||||||
|
if self.output_activation_function == self.ACTIVATION_FUNCTION_AFFINE:
|
||||||
|
self.output_layer_value = self.linear(self.layer_value[-1], self.output_weight, self.output_bias)
|
||||||
|
elif self.output_activation_function == self.ACTIVATION_FUNCTION_SIGMOID:
|
||||||
|
self.output_layer_value = self.sigmoid(self.linear(self.layer_value[-1], self.output_weight, self.output_bias))
|
||||||
|
elif self.output_activation_function == self.ACTIVATION_FUNCTION_TANH:
|
||||||
|
self.output_layer_value = self.tanh(self.linear(self.layer_value[-1], self.output_weight, self.output_bias))
|
||||||
|
elif self.output_activation_function == self.ACTIVATION_FUNCTION_RELU:
|
||||||
|
self.output_layer_value = self.relu(self.linear(self.layer_value[-1], self.output_weight, self.output_bias))
|
||||||
|
elif self.output_activation_function == self.ACTIVATION_FUNCTION_SOFTMAX:
|
||||||
|
self.output_layer_value = self.softmax(self.linear(self.layer_value[-1], self.output_weight, self.output_bias), axis=1)
|
||||||
|
elif self.output_activation_function == self.ACTIVATION_FUNCTION_REVERSE_LAYER:
|
||||||
|
self.output_layer_value = self.reverse_layer(self.layer_value[-1])
|
||||||
|
|
||||||
|
return self
|
||||||
|
|
||||||
|
def calculate_error(self, y: torch.tensor):
|
||||||
|
self.error_value = y - self.output_layer_value
|
||||||
|
|
||||||
|
if self.loss_function == self.LOSS_FUNCTION_MSE:
|
||||||
|
self.loss_value = torch.nn.functional.mse_loss(self.output_layer_value, y)
|
||||||
|
elif self.loss_function == self.LOSS_FUNCTION_CROSS_ENTROPY:
|
||||||
|
self.loss_value = torch.nn.functional.cross_entropy(self.output_layer_value, torch.argmax(y, 1))
|
||||||
|
|
||||||
|
return self
|
||||||
|
|
||||||
|
def compute_expected_values(self, in_place: bool = False):
|
||||||
|
self.data_mean, self.data_variance, self.data_standard_deviation = \
|
||||||
|
MyUtil.recursive_mean_standard_deviation(self.layer_value[0],
|
||||||
|
self.data_mean,
|
||||||
|
self.data_variance,
|
||||||
|
self.number_samples_feed)
|
||||||
|
|
||||||
|
self.Eh, self.Eh2 = self.compute_inbound_expected_values()
|
||||||
|
|
||||||
|
def compute_inbound_expected_values(self, number_hidden_layer: int = None):
|
||||||
|
nhl = number_hidden_layer # readability
|
||||||
|
if nhl is None:
|
||||||
|
nhl = self.number_hidden_layers - 1
|
||||||
|
|
||||||
|
if nhl == 0:
|
||||||
|
inference, center, std = (1, self.data_mean, self.data_standard_deviation)
|
||||||
|
py = MyUtil.probit(center, std)
|
||||||
|
Eh = inference * self.sigmoid(self.linear(self.weight[0], py, self.bias[0].T))
|
||||||
|
else:
|
||||||
|
Eh, _ = self.compute_inbound_expected_values(number_hidden_layer=nhl - 1)
|
||||||
|
weight, bias = (self.weight[nhl], self.bias[nhl]) if nhl < self.number_hidden_layers + 1 else (self.output_weight, self.output_bias)
|
||||||
|
Eh = self.sigmoid(self.linear(weight, Eh.T, bias.T))
|
||||||
|
|
||||||
|
return Eh, Eh ** 2
|
||||||
|
|
||||||
|
@property
|
||||||
|
def Eh(self):
|
||||||
|
return self.__Eh
|
||||||
|
|
||||||
|
@Eh.setter
|
||||||
|
def Eh(self, value: torch.tensor):
|
||||||
|
self.__Eh = value
|
||||||
|
|
||||||
|
@property
|
||||||
|
def Eh2(self):
|
||||||
|
return self.__Eh2
|
||||||
|
|
||||||
|
@Eh2.setter
|
||||||
|
def Eh2(self, value: torch.tensor):
|
||||||
|
self.__Eh2 = value
|
||||||
|
|
||||||
|
@property
|
||||||
|
def Ey(self):
|
||||||
|
return self.softmax(self.linear(self.output_weight, self.Eh.T, self.output_bias.T), axis=0)
|
||||||
|
|
||||||
|
@property
|
||||||
|
def Ey2(self):
|
||||||
|
return self.softmax(self.linear(self.output_weight, self.Eh2.T, self.output_bias.T), axis=0)
|
||||||
|
|
||||||
|
@property
|
||||||
|
def network_variance(self):
|
||||||
|
return MyUtil.frobenius_norm(self.Ey2 - self.Ey ** 2)
|
||||||
|
|
||||||
|
def compute_bias(self, y):
|
||||||
|
return MyUtil.frobenius_norm((self.Ey.T - y) ** 2)
|
||||||
|
|
||||||
|
def width_adaptation_stepwise(self, y, prune_strategy: int = None):
|
||||||
|
if prune_strategy is None:
|
||||||
|
prune_strategy = self.PRUNE_NODE_STRATEGY_MULTIPLE
|
||||||
|
|
||||||
|
nhl: int = self.number_hidden_layers
|
||||||
|
|
||||||
|
self.number_samples_feed = self.number_samples_feed + 1
|
||||||
|
self.number_samples_layer[nhl] = self.number_samples_layer[nhl] + 1
|
||||||
|
self.compute_expected_values()
|
||||||
|
|
||||||
|
self.bias_mean[nhl], self.bias_variance[nhl], self.bias_standard_deviation[nhl] = \
|
||||||
|
MyUtil.recursive_mean_standard_deviation(self.compute_bias(y),
|
||||||
|
self.bias_mean[nhl],
|
||||||
|
self.bias_variance[nhl],
|
||||||
|
self.number_samples_feed)
|
||||||
|
|
||||||
|
self.var_mean[nhl], self.var_variance[nhl], self.var_standard_deviation[nhl] = \
|
||||||
|
MyUtil.recursive_mean_standard_deviation(self.network_variance,
|
||||||
|
self.var_mean[nhl],
|
||||||
|
self.var_variance[nhl],
|
||||||
|
self.number_samples_feed)
|
||||||
|
|
||||||
|
if self.number_samples_layer[nhl] <= 1 or self.growable[nhl]:
|
||||||
|
self.minimum_bias_mean[nhl] = self.bias_mean[nhl]
|
||||||
|
self.minimum_bias_standard_deviation[nhl] = self.bias_standard_deviation[nhl]
|
||||||
|
else:
|
||||||
|
self.minimum_bias_mean[nhl] = np.min([self.minimum_bias_mean[nhl], self.bias_mean[nhl]])
|
||||||
|
self.minimum_bias_standard_deviation[nhl] = np.min([self.minimum_bias_standard_deviation[nhl], self.bias_standard_deviation[nhl]])
|
||||||
|
|
||||||
|
if self.number_samples_layer[nhl] <= self.input_size + 1 or self.prunable[nhl][0] != -1:
|
||||||
|
self.minimum_var_mean[nhl] = self.var_mean[nhl]
|
||||||
|
self.minimum_var_standard_deviation[nhl] = self.var_standard_deviation[nhl]
|
||||||
|
else:
|
||||||
|
self.minimum_var_mean[nhl] = np.min([self.minimum_var_mean[nhl], self.var_mean[nhl]])
|
||||||
|
self.minimum_var_standard_deviation[nhl] = np.min([self.minimum_var_standard_deviation[nhl], self.var_standard_deviation[nhl]])
|
||||||
|
|
||||||
|
self.BIAS.append(self.bias_mean[nhl])
|
||||||
|
self.VAR.append(self.var_mean[nhl])
|
||||||
|
|
||||||
|
if self.output_size == 512: # STL or CIFAR
|
||||||
|
alpha_1 = 1.45
|
||||||
|
alpha_2 = 0.95
|
||||||
|
else:
|
||||||
|
alpha_1 = 1.25
|
||||||
|
alpha_2 = 0.75
|
||||||
|
|
||||||
|
self.growable[nhl] = self.is_growable(self.compute_bias(y), alpha_1, alpha_2)
|
||||||
|
self.prunable[nhl] = self.is_prunable(prune_strategy, 2 * alpha_1, 2 * alpha_2)
|
||||||
|
|
||||||
|
def is_growable(self, bias: torch.tensor, alpha_1: float = 1.25, alpha_2: float = 0.75):
|
||||||
|
nhl = self.number_hidden_layers # readability
|
||||||
|
|
||||||
|
current = self.bias_mean[nhl] + self.bias_standard_deviation[nhl]
|
||||||
|
biased_min = self.minimum_bias_mean[nhl] \
|
||||||
|
+ (alpha_1 * torch.exp(-bias) + alpha_2) * self.minimum_bias_standard_deviation[nhl]
|
||||||
|
|
||||||
|
if self.number_samples_layer[nhl] > 1 and current >= biased_min:
|
||||||
|
return True
|
||||||
|
return False
|
||||||
|
|
||||||
|
def is_prunable(self, prune_strategy: int = None, alpha_1: float = 2.5, alpha_2: float = 1.5):
|
||||||
|
if prune_strategy is None:
|
||||||
|
prune_strategy = self.PRUNE_NODE_STRATEGY_MULTIPLE
|
||||||
|
nhl = self.number_hidden_layers # readability
|
||||||
|
|
||||||
|
current = self.var_mean[nhl] + self.var_standard_deviation[nhl]
|
||||||
|
biased_min = self.minimum_var_mean[nhl] \
|
||||||
|
+ (alpha_1 * torch.exp(-self.network_variance) + alpha_2) * self.minimum_var_standard_deviation[nhl]
|
||||||
|
|
||||||
|
if not self.growable[nhl] \
|
||||||
|
and self.layers[nhl] > 1 \
|
||||||
|
and self.number_samples_layer[nhl] > self.input_size + 1 \
|
||||||
|
and current >= biased_min:
|
||||||
|
|
||||||
|
if prune_strategy == self.PRUNE_NODE_STRATEGY_SINGLE:
|
||||||
|
return torch.argmin(self.Eh)
|
||||||
|
elif prune_strategy == self.PRUNE_NODE_STRATEGY_MULTIPLE:
|
||||||
|
nodes_to_prune = torch.where(self.Eh < torch.abs(torch.mean(self.Eh) - torch.var(self.Eh)))
|
||||||
|
if len(nodes_to_prune[0]):
|
||||||
|
return nodes_to_prune[0]
|
||||||
|
else:
|
||||||
|
return torch.argmin(self.Eh)
|
||||||
|
|
||||||
|
return [-1]
|
||||||
|
|
||||||
|
def grow_node(self, layer_number: int):
|
||||||
|
self.layers[layer_number] += 1
|
||||||
|
if layer_number >= 0:
|
||||||
|
self.grow_weight_row(layer_number - 1)
|
||||||
|
self.grow_bias(layer_number - 1)
|
||||||
|
if layer_number <= self.number_hidden_layers:
|
||||||
|
self.grow_weight_column(layer_number)
|
||||||
|
|
||||||
|
def grow_weight_row(self, layer_number: int):
|
||||||
|
def add_element(tensor_data: torch.tensor, momentum_tensor_data: torch.tensor, n_out: int):
|
||||||
|
tensor_data = torch.cat((tensor_data, self.xavier_weight_initialization(1, n_out)), axis=0)
|
||||||
|
momentum_tensor_data = torch.cat((momentum_tensor_data, torch.zeros(1, n_out, dtype=torch.float, device=MyDevice().get())), axis=0)
|
||||||
|
return tensor_data, momentum_tensor_data
|
||||||
|
|
||||||
|
if layer_number >= len(self.weight):
|
||||||
|
[_, n_out] = self.output_weight.shape
|
||||||
|
self.output_weight, self.output_momentum = add_element(self.output_weight, self.output_momentum, n_out)
|
||||||
|
else:
|
||||||
|
[_, n_out] = self.weight[layer_number].shape
|
||||||
|
self.weight[layer_number], self.momentum[layer_number] = add_element(self.weight[layer_number], self.momentum[layer_number], n_out)
|
||||||
|
|
||||||
|
def grow_weight_column(self, layer_number: int):
|
||||||
|
def add_element(tensor_data: torch.tensor, momentum_tensor_data: torch.tensor, n_out: int):
|
||||||
|
tensor_data = torch.cat((tensor_data, self.xavier_weight_initialization(n_out, 1)), axis=1)
|
||||||
|
momentum_tensor_data = torch.cat((momentum_tensor_data, torch.zeros(n_out, 1, dtype=torch.float, device=MyDevice().get())), axis=1)
|
||||||
|
return tensor_data, momentum_tensor_data
|
||||||
|
|
||||||
|
if layer_number >= len(self.weight):
|
||||||
|
[n_out, _] = self.output_weight.shape
|
||||||
|
self.output_weight, self.output_momentum = add_element(self.output_weight, self.output_momentum, n_out)
|
||||||
|
else:
|
||||||
|
[n_out, _] = self.weight[layer_number].shape
|
||||||
|
self.weight[layer_number], self.momentum[layer_number] = add_element(self.weight[layer_number], self.momentum[layer_number], n_out)
|
||||||
|
|
||||||
|
def grow_bias(self, layer_number):
|
||||||
|
def add_element(tensor_data: torch.tensor, momentum_tensor_data: torch.tensor, n_out: int):
|
||||||
|
tensor_data = torch.cat((tensor_data, self.xavier_weight_initialization(1, n_out)), axis=1)
|
||||||
|
momentum_tensor_data = torch.cat((momentum_tensor_data, torch.zeros(1, n_out, dtype=torch.float, device=MyDevice().get())), axis=1)
|
||||||
|
return tensor_data, momentum_tensor_data
|
||||||
|
|
||||||
|
if layer_number >= len(self.bias):
|
||||||
|
[n_out, _] = self.output_bias.shape
|
||||||
|
self.output_bias, self.output_bias_momentum = add_element(self.output_bias, self.output_bias_momentum, n_out)
|
||||||
|
else:
|
||||||
|
[n_out, _] = self.bias[layer_number].shape
|
||||||
|
self.bias[layer_number], self.bias_momentum[layer_number] = add_element(self.bias[layer_number], self.bias_momentum[layer_number], n_out)
|
||||||
|
pass
|
||||||
|
|
||||||
|
def prune_node(self, layer_number: int, node_number: int):
|
||||||
|
self.layers[layer_number] -= 1
|
||||||
|
if layer_number >= 0:
|
||||||
|
self.prune_weight_row(layer_number - 1, node_number)
|
||||||
|
self.prune_bias(layer_number - 1, node_number)
|
||||||
|
if layer_number <= self.number_hidden_layers:
|
||||||
|
self.prune_weight_column(layer_number, node_number)
|
||||||
|
|
||||||
|
def prune_weight_row(self, layer_number: int, node_number: int):
|
||||||
|
def remove_nth_row(tensor_data: torch.tensor, n: int):
|
||||||
|
return torch.cat([tensor_data[:n], tensor_data[n+1:]])
|
||||||
|
|
||||||
|
if layer_number >= len(self.weight):
|
||||||
|
self.output_weight = remove_nth_row(self.output_weight, node_number)
|
||||||
|
self.output_momentum = remove_nth_row(self.output_momentum, node_number)
|
||||||
|
else:
|
||||||
|
self.weight[layer_number] = remove_nth_row(self.weight[layer_number], node_number)
|
||||||
|
self.momentum[layer_number] = remove_nth_row(self.momentum[layer_number], node_number)
|
||||||
|
|
||||||
|
def prune_weight_column(self, layer_number: int, node_number: int):
|
||||||
|
def remove_nth_column(weight_tensor: torch.tensor, n: int):
|
||||||
|
return torch.cat([weight_tensor.T[:n], weight_tensor.T[n+1:]]).T
|
||||||
|
|
||||||
|
if layer_number >= len(self.weight):
|
||||||
|
self.output_weight = remove_nth_column(self.output_weight, node_number)
|
||||||
|
self.output_momentum = remove_nth_column(self.output_momentum, node_number)
|
||||||
|
else:
|
||||||
|
self.weight[layer_number] = remove_nth_column(self.weight[layer_number], node_number)
|
||||||
|
self.momentum[layer_number] = remove_nth_column(self.momentum[layer_number], node_number)
|
||||||
|
|
||||||
|
def prune_bias(self, layer_number: int, node_number: int):
|
||||||
|
def remove_nth_element(bias_tensor: torch.tensor, n: int):
|
||||||
|
bias_tensor = torch.cat([bias_tensor[0][:n], bias_tensor[0][n+1:]])
|
||||||
|
return bias_tensor.view(1, bias_tensor.shape[0])
|
||||||
|
|
||||||
|
if layer_number >= len(self.bias):
|
||||||
|
self.output_bias = remove_nth_element(self.output_bias, node_number)
|
||||||
|
self.output_bias_momentum = remove_nth_element(self.output_bias_momentum, node_number)
|
||||||
|
else:
|
||||||
|
self.bias[layer_number] = remove_nth_element(self.bias[layer_number], node_number)
|
||||||
|
self.bias_momentum[layer_number] = remove_nth_element(self.bias_momentum[layer_number], node_number)
|
||||||
Loading…
Reference in New Issue