213 lines
4.2 KiB
C
213 lines
4.2 KiB
C
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#include <stdio.h>
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#include <string.h>
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#include <stdlib.h>
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#include <ctype.h>
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#include <errno.h>
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#include "mex.h"
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#ifdef MX_API_VER
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#if MX_API_VER < 0x07030000
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typedef int mwIndex;
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#endif
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#endif
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#ifndef max
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#define max(x,y) (((x)>(y))?(x):(y))
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#endif
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#ifndef min
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#define min(x,y) (((x)<(y))?(x):(y))
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#endif
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void exit_with_help()
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{
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mexPrintf(
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"Usage: [label_vector, instance_matrix] = libsvmread('filename');\n"
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);
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}
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static void fake_answer(int nlhs, mxArray *plhs[])
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{
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int i;
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for(i=0;i<nlhs;i++)
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plhs[i] = mxCreateDoubleMatrix(0, 0, mxREAL);
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}
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static char *line;
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static int max_line_len;
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static char* readline(FILE *input)
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{
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int len;
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if(fgets(line,max_line_len,input) == NULL)
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return NULL;
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while(strrchr(line,'\n') == NULL)
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{
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max_line_len *= 2;
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line = (char *) realloc(line, max_line_len);
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len = (int) strlen(line);
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if(fgets(line+len,max_line_len-len,input) == NULL)
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break;
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}
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return line;
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}
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// read in a problem (in libsvm format)
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void read_problem(const char *filename, int nlhs, mxArray *plhs[])
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{
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int max_index, min_index, inst_max_index;
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size_t elements, k, i, l=0;
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FILE *fp = fopen(filename,"r");
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char *endptr;
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mwIndex *ir, *jc;
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double *labels, *samples;
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if(fp == NULL)
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{
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mexPrintf("can't open input file %s\n",filename);
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fake_answer(nlhs, plhs);
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return;
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}
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max_line_len = 1024;
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line = (char *) malloc(max_line_len*sizeof(char));
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max_index = 0;
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min_index = 1; // our index starts from 1
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elements = 0;
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while(readline(fp) != NULL)
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{
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char *idx, *val;
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// features
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int index = 0;
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inst_max_index = -1; // strtol gives 0 if wrong format, and precomputed kernel has <index> start from 0
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strtok(line," \t"); // label
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while (1)
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{
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idx = strtok(NULL,":"); // index:value
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val = strtok(NULL," \t");
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if(val == NULL)
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break;
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errno = 0;
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index = (int) strtol(idx,&endptr,10);
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if(endptr == idx || errno != 0 || *endptr != '\0' || index <= inst_max_index)
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{
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mexPrintf("Wrong input format at line %d\n",l+1);
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fake_answer(nlhs, plhs);
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return;
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}
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else
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inst_max_index = index;
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min_index = min(min_index, index);
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elements++;
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}
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max_index = max(max_index, inst_max_index);
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l++;
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}
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rewind(fp);
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// y
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plhs[0] = mxCreateDoubleMatrix(l, 1, mxREAL);
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// x^T
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if (min_index <= 0)
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plhs[1] = mxCreateSparse(max_index-min_index+1, l, elements, mxREAL);
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else
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plhs[1] = mxCreateSparse(max_index, l, elements, mxREAL);
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labels = mxGetPr(plhs[0]);
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samples = mxGetPr(plhs[1]);
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ir = mxGetIr(plhs[1]);
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jc = mxGetJc(plhs[1]);
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k=0;
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for(i=0;i<l;i++)
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{
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char *idx, *val, *label;
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jc[i] = k;
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readline(fp);
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label = strtok(line," \t\n");
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if(label == NULL)
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{
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mexPrintf("Empty line at line %d\n",i+1);
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fake_answer(nlhs, plhs);
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return;
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}
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labels[i] = strtod(label,&endptr);
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if(endptr == label || *endptr != '\0')
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{
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mexPrintf("Wrong input format at line %d\n",i+1);
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fake_answer(nlhs, plhs);
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return;
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}
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// features
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while(1)
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{
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idx = strtok(NULL,":");
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val = strtok(NULL," \t");
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if(val == NULL)
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break;
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ir[k] = (mwIndex) (strtol(idx,&endptr,10) - min_index); // precomputed kernel has <index> start from 0
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errno = 0;
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samples[k] = strtod(val,&endptr);
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if (endptr == val || errno != 0 || (*endptr != '\0' && !isspace(*endptr)))
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{
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mexPrintf("Wrong input format at line %d\n",i+1);
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fake_answer(nlhs, plhs);
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return;
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}
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++k;
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}
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}
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jc[l] = k;
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fclose(fp);
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free(line);
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{
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mxArray *rhs[1], *lhs[1];
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rhs[0] = plhs[1];
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if(mexCallMATLAB(1, lhs, 1, rhs, "transpose"))
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{
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mexPrintf("Error: cannot transpose problem\n");
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fake_answer(nlhs, plhs);
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return;
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}
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plhs[1] = lhs[0];
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}
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}
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void mexFunction( int nlhs, mxArray *plhs[],
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int nrhs, const mxArray *prhs[] )
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{
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char filename[256];
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if(nrhs != 1 || nlhs != 2)
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{
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exit_with_help();
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fake_answer(nlhs, plhs);
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return;
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}
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mxGetString(prhs[0], filename, mxGetN(prhs[0]) + 1);
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if(filename == NULL)
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{
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mexPrintf("Error: filename is NULL\n");
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return;
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}
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read_problem(filename, nlhs, plhs);
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return;
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}
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